SR7P [2020-09-10 09:30:54]

antisense RNA to [gene|789D08564463542B8D96FC12F408549A669703CE|rpsD] and small effector protein for the control of [protein|67651D5D3122A89F57F9E7D49074C82A8990A277|Eno]-[protein|872CCB5A49C9000BD95E4B0472556D5F60F7D7A4|RNase Y] interaction

locus: new_3036310_3036529_c

pI: 0.00

mw: 0.00 kDa

gene length: 220 bp

function: control of [gene|789D08564463542B8D96FC12F408549A669703CE|rpsD] expression, control of [protein|872CCB5A49C9000BD95E4B0472556D5F60F7D7A4|RNase Y] activity

product: antisense RNA to [gene|789D08564463542B8D96FC12F408549A669703CE|rpsD], regulatory protein

essential: no

synonyms: S1136,SR7

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.2|RNA synthesis and degradation] → [category|SW 3.2.4|RNases] → [category|SW 3.2.4.5|Effectors of RNA degradation]
• [category|SW 6|Groups of genes] → [category|SW 6.9|NcRNA] → [category|SW 6.9.5|Regulatory RNAs]

Gene

Coordinates: 3,036,310 → 3,036,529

RNA

Catalyzed reaction/ biological activity

• control of [gene|789D08564463542B8D96FC12F408549A669703CE|rpsD] expression, acts as antisense RNA [pubmed|26115952]

The protein

Catalyzed reaction/ biological activity

• control of [protein|67651D5D3122A89F57F9E7D49074C82A8990A277|Eno]-[protein|872CCB5A49C9000BD95E4B0472556D5F60F7D7A4|RNase Y] interaction, the presence of the small protein enhances the interaction as well as [protein|872CCB5A49C9000BD95E4B0472556D5F60F7D7A4|RNase Y] activity [pubmed|32752915]

Expression and Regulation

Operons

• genes: [gene|19080097FD3F48C730C355DE84C1922206A07AFF|SR7P]-[gene|A404BDF296F44CDEE6E0B6290369C6657A56D12A|S1134]
  description: [pubmed|22383849]

  sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [pubmed|26115952], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]

References

Research papers

• 26115952,32752915